PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GRMZM2G429378_P01
Common NameEREB175, ZEAMMB73_643574
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
Family ERF
Protein Properties Length: 315aa    MW: 32986.8 Da    PI: 4.7542
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GRMZM2G429378_P01genomeMaizeSequenceView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.75.8e-1899149155
                AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                        ++y+GVr+++ +gr++AeIrdp     +  r +lg+f+taeeAa++++   ++l+g
  GRMZM2G429378_P01  99 PRYRGVRRRP-WGRYAAEIRDPH----KgERLWLGTFDTAEEAARRYDSETRRLRG 149
                        68********.**********72....35*******************99888887 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008472.1E-1199142IPR001471AP2/ERF domain
CDDcd000188.91E-2999159No hitNo description
Gene3DG3DSA:3.30.730.101.7E-29100158IPR001471AP2/ERF domain
PROSITE profilePS5103223.024100157IPR001471AP2/ERF domain
SuperFamilySSF541718.5E-21100158IPR016177DNA-binding domain
SMARTSM003802.6E-32100163IPR001471AP2/ERF domain
PRINTSPR003674.2E-10101112IPR001471AP2/ERF domain
PRINTSPR003674.2E-10123139IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 315 aa     Download sequence    Send to blast
MVEAAAVSRS RPKIKQEPAE TTAICKLVRV FCDDRDSTDS SGDEAAAGGG AGAAAGARKF  60
LVEISVEKHQ PRCNAMAPAG RAAGGGKRKA AAAGTPAEPR YRGVRRRPWG RYAAEIRDPH  120
KGERLWLGTF DTAEEAARRY DSETRRLRGP SAITNFPATP DDRVPLPAPA LSLHGVAAVG  180
EHSSAEEESC DESQLVVGSP VSVLRAMPDE TARATLPPKI ADAAAGCATK KDAPDGRGGL  240
SPFSADDALL PQLGEDAFSF GGVPFDDDLP TPQLGLDYLA ADPALDLGSL PMWPGVDGCR  300
FSDIGDDDLF SLPAL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A4e-18101157663ATERF1
3gcc_A4e-18101157663ATERF1
Search in ModeBase
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Zm.1259520.0endosperm
Expression -- Microarray ? help Back to Top
Source ID
Expression AtlasGRMZM2G429378
Cis-element ? help Back to Top
SourceLink
PlantRegMapGRMZM2G429378_P01
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKJ7276790.0KJ727679.1 Zea mays clone pUT5607 AP2-EREBP transcription factor (EREB175) gene, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008659266.10.0PREDICTED: ethylene-responsive transcription factor ERF018-like
TrEMBLK7V6M60.0K7V6M6_MAIZE; AP2-EREBP transcription factor
STRINGGRMZM2G429378_P010.0(Zea mays)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP131332332
Representative plantOGRP6161718
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G50640.13e-15ethylene responsive element binding factor 3